miRBase entry: cpo-mir-10a

Stem-loop cpo-mir-10a


Accession
MI0038559
Description
Cavia porcellus cpo-mir-10a precursor miRNA


Sequence

UACCCUGUAGGUCCGAAUUUGUguaaggaauuuuauggucaCAAAUUCGUAUCUAGGGGAAUA
...(((.(((((.((((((((((................)))))))))).))))).)))....

Structure
-UAC   G     C          uaaggaa 
    CCU UAGGU CGAAUUUGUg       u
    ||| ||||| ||||||||||        
    GGG AUCUA GCUUAAACac       u
AUAA   G     U          ugguauu 


Annotation confidence Not enough data
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Genome context
DS562908.1: 8675059-8675121 [+]

Database links

Mature cpo-miR-10a-5p

Accession MIMAT0046845
Description Cavia porcellus cpo-miR-10a-5p mature miRNA
Sequence 1 - UACCCUGUAGGUCCGAAUUUGU - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-10a-3p

Accession MIMAT0046846
Description Cavia porcellus cpo-miR-10a-3p mature miRNA
Sequence 42 - CAAAUUCGUAUCUAGGGGAAUA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344