miRBase entry: cpo-mir-125b-1

Stem-loop cpo-mir-125b-1


Accession
MI0038625
Description
Cavia porcellus cpo-mir-125b-1 precursor miRNA


Sequence

UCCCUGAGACCCUAACUUGUGAuguuuaccguuuaaauccACGGGUUAGGCUCUUGGGAGCU
((((.((((.(((((((((((..(((((.....))))).))))))))))).))))))))...

Structure
---    U    C           Au     c 
   UCCC GAGA CCUAACUUGUG  guuua c
   |||| |||| |||||||||||  ||||| g
   AGGG UUCU GGAUUGGGCAc  uaaau u
UCG    -    C           -c     u 


Annotation confidence Not enough data
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Genome context
DS562874.1: 26176071-26176132 [+]

Database links

Mature cpo-miR-125b-5p

Accession MIMAT0046967
Description Cavia porcellus cpo-miR-125b-5p mature miRNA
Sequence 1 - UCCCUGAGACCCUAACUUGUGA - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-125b-3p

Accession MIMAT0046968
Description Cavia porcellus cpo-miR-125b-3p mature miRNA
Sequence 41 - ACGGGUUAGGCUCUUGGGAGCU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344