miRBase entry: cpo-mir-136

Stem-loop cpo-mir-136


Accession
MI0038643
Description
Cavia porcellus cpo-mir-136 precursor miRNA


Sequence

ACUCCAUUUGUUUUGAUGAUGGAuucuuacgcucCAUCAUCGUCUCAAAUGAGUCU
((((.(((((...((((((((((.........))))))))))...)))))))))..

Structure
--    C     UUU          uuc 
  ACUC AUUUG   UGAUGAUGGA   u
  |||| |||||   ||||||||||   u
  UGAG UAAAC   GCUACUACcu   a
UC    -     UCU          cgc 


Annotation confidence Not enough data
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Genome context
DS562966.1: 955349-955404 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from cpo-mir-136
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-136-5p

Accession MIMAT0046997
Description Cavia porcellus cpo-miR-136-5p mature miRNA
Sequence 1 - ACUCCAUUUGUUUUGAUGAUGGA - 23
Evidence experimental
Illumina [1]

Mature cpo-miR-136-3p

Accession MIMAT0046998
Description Cavia porcellus cpo-miR-136-3p mature miRNA
Sequence 35 - CAUCAUCGUCUCAAAUGAGUCU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344