Stem-loop cpo-mir-139

Accession

MI0038646

Description

Cavia porcellus cpo-mir-139 precursor miRNA

Sequence

guguauUCUACAGUGCACGUGUCUCCAGCguggcucggaggcUGGAGACGCGGCCCUGUUGGAGUaac
...((((((((((.((.((((((((((((.(.......).)))))))))))))).))).)))))))..

Structure

gug       -   U  A            g gg 
   uauUCUA CAG GC CGUGUCUCCAGC u  c
   ||||||| ||| || |||||||||||| |  u
   aUGAGGU GUC CG GCGCAGAGGUcg a  c
-ca       U   C  -            g gg 

Annotation confidence Not enough data

Genome context

DS562958.1: 2790717-2790784 [+]

Mature cpo-miR-139-5p

• Accession: MIMAT0047002
• Description: Cavia porcellus cpo-miR-139-5p mature miRNA
• Sequence: 7 - UCUACAGUGCACGUGUCUCCAGC - 29
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-139-3p

• Accession: MIMAT0047003
• Description: Cavia porcellus cpo-miR-139-3p mature miRNA
• Sequence: 43 - UGGAGACGCGGCCCUGUUGGAGU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344