Stem-loop cpo-mir-143

Accession

MI0038650

Description

Cavia porcellus cpo-mir-143 precursor miRNA

Sequence

GGUGCAGUGCUGCAUCUCUGGucaguugggagucUGAGAUGAAGCACUGUAGCUC
(.(((((((((.((((((.((((......)).)).)))))).))))))))).)..

Structure

-- G         G      U  -  ag 
  G UGCAGUGCU CAUCUC GG uc  u
  | ||||||||| |||||| || ||   
  C AUGUCACGA GUAGAG cu ag  u
CU G         A      U  g  gg 

Annotation confidence Not enough data

Genome context

DS562861.1: 11376289-11376343 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-143

Mature cpo-miR-143-5p

• Accession: MIMAT0047010
• Description: Cavia porcellus cpo-miR-143-5p mature miRNA
• Sequence: 1 - GGUGCAGUGCUGCAUCUCUGG - 21
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-143-3p

• Accession: MIMAT0047011
• Description: Cavia porcellus cpo-miR-143-3p mature miRNA
• Sequence: 35 - UGAGAUGAAGCACUGUAGCUC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344