miRBase entry: cpo-mir-146a

Stem-loop cpo-mir-146a


Accession
MI0038653
Description
Cavia porcellus cpo-mir-146a precursor miRNA

Literature search
1 open access papers mention cpo-mir-146a
(1 sentences)

Sequence

UGAGAACUGAAUUCCAUGGGUUGugucagcgucagACCUGUGAAAUUCAGUUCUUCAG
.((((((((((((.((((((((.((.......)))))))))).))))))))))))...

Structure
--U            C        G  uc 
   GAGAACUGAAUU CAUGGGUU ug  a
   |||||||||||| |||||||| ||  g
   UUCUUGACUUAA GUGUCCAg ac  c
GAC            A        -  ug 


Annotation confidence Not enough data
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Genome context
DS562872.1: 7375710-7375767 [+]

Database links

Mature cpo-miR-146a-5p

Accession MIMAT0047016
Description Cavia porcellus cpo-miR-146a-5p mature miRNA
Sequence 1 - UGAGAACUGAAUUCCAUGGGUUG - 23
Evidence experimental
Illumina [1]

Mature cpo-miR-146a-3p

Accession MIMAT0047017
Description Cavia porcellus cpo-miR-146a-3p mature miRNA
Sequence 36 - ACCUGUGAAAUUCAGUUCUUCAG - 58
Evidence not_experimental

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344