miRBase entry: cpo-mir-181c

Stem-loop cpo-mir-181c


Accession
MI0038669
Description
Cavia porcellus cpo-mir-181c precursor miRNA


Sequence

AACAUUCAACCUGUCGGUGAGUUUggacgacucaggcaaACCAUCGACCGUUGAGUGGACC
..((((((((..(((((((.(((((..(......).)))))))))))).))))))))....

Structure
--AA        CU       A     ga ga 
    CAUUCAAC  GUCGGUG GUUUg  c  c
    ||||||||  ||||||| |||||  |   
    GUGAGUUG  CAGCUAC CAaac  g  u
CCAG        -C       -     -g ac 


Annotation confidence Not enough data
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Genome context
DS562897.1: 12912419-12912479 [-]

Database links

Mature cpo-miR-181c-5p

Accession MIMAT0047046
Description Cavia porcellus cpo-miR-181c-5p mature miRNA
Sequence 1 - AACAUUCAACCUGUCGGUGAGUUU - 24
Evidence experimental
Illumina [1]

Mature cpo-miR-181c-3p

Accession MIMAT0047047
Description Cavia porcellus cpo-miR-181c-3p mature miRNA
Sequence 40 - ACCAUCGACCGUUGAGUGGACC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344