miRBase entry: cpo-mir-191

Stem-loop cpo-mir-191

Accession

MI0038679

Description

Cavia porcellus cpo-mir-191 precursor miRNA

Sequence

CAACGGAAUCCCAAAAGCAGCUGuugucuugagagcauuccaGCUGCGCUUGGAUUUCGUUCCC
.((((((((((.((..(((((((.(((.......)))...)))))))..))))))))))))...

Structure

--C          C  AA       --u   cu 
   AACGGAAUCC AA  GCAGCUG   ugu  u
   |||||||||| ||  |||||||   |||  g
   UUGCUUUAGG UU  CGUCGac   acg  a
CCC          -  CG       cuu   ag

Annotation confidence Not enough data

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Genome context

DS562863.1: 24185925-24185988 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-191

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-191-5p

Accession	MIMAT0047066
Description	Cavia porcellus cpo-miR-191-5p mature miRNA
Sequence	1 - CAACGGAAUCCCAAAAGCAGCUG - 23
Evidence	experimental Illumina [1]

Mature cpo-miR-191-3p

Accession	MIMAT0047067
Description	Cavia porcellus cpo-miR-191-3p mature miRNA
Sequence	43 - GCUGCGCUUGGAUUUCGUUCCC - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344