miRBase entry: cpo-mir-193b

Stem-loop cpo-mir-193b

Accession

MI0038682

Description

Cavia porcellus cpo-mir-193b precursor miRNA

Sequence

CGGGGUUUUGAGGGCGAGAUGAguuuauguuuuauccAACUGGCCCACAAAGUCCCGCU
((((((((((.((((.((.((.((.........)).)).)).)))).))))))))))..

Structure

--          A    G  A  A  uua 
  CGGGGUUUUG GGGC AG UG gu   u
  |||||||||| |||| || || ||   g
  GCCCUGAAAC CCCG UC Ac ua   u
UC          A    G  A  c  uuu

Annotation confidence Not enough data

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Genome context

DS562859.1: 33124944-33125002 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-193b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-193b-5p

Accession	MIMAT0047072
Description	Cavia porcellus cpo-miR-193b-5p mature miRNA
Sequence	1 - CGGGGUUUUGAGGGCGAGAUGA - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-193b-3p

Accession	MIMAT0047073
Description	Cavia porcellus cpo-miR-193b-3p mature miRNA
Sequence	38 - AACUGGCCCACAAAGUCCCGCU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344