miRBase entry: cpo-mir-218-2

Stem-loop cpo-mir-218-2


Accession
MI0038711
Description
Cavia porcellus cpo-mir-218-2 precursor miRNA


Sequence

UUGUGCUUGAUCUAACCAUGUGguggaacgauggaaacggaaCAUGGUUCUGUCAAGCACCGCG
..(((((((((..((((((((..((............))..))))))))..)))))))))....

Structure
--UU         CU        Gg  gaacg 
    GUGCUUGAU  AACCAUGU  ug     a
    |||||||||  ||||||||  ||      
    CACGAACUG  UUGGUACa  gc     u
GCGC         UC        ag  aaagg 


Annotation confidence Not enough data
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Genome context
DS562872.1: 14934416-14934479 [-]

Database links

Mature cpo-miR-218-5p

Accession MIMAT0047125
Description Cavia porcellus cpo-miR-218-5p mature miRNA
Sequence 1 - UUGUGCUUGAUCUAACCAUGUG - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-218-2-3p

Accession MIMAT0047127
Description Cavia porcellus cpo-miR-218-2-3p mature miRNA
Sequence 43 - CAUGGUUCUGUCAAGCACCGCG - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344