miRBase entry: cpo-mir-223

Stem-loop cpo-mir-223


Accession
MI0038715
Description
Cavia porcellus cpo-mir-223 precursor miRNA

Literature search
2 open access papers mention cpo-mir-223
(3 sentences)

Sequence

CGUGUAUUUGACAAGCUGAGUUGgacacuccaugugguagagUGUCAGUUUGUCAAAUACCCCAA
...((((((((((((((......(((((((.........))))))))))))))))))))).....

Structure
--CGU              GAGUUG       cau 
     GUAUUUGACAAGCU      gacacuc   g
     ||||||||||||||      |||||||   u
     CAUAAACUGUUUGA      CUGUgag   g
AACCC              ------       aug 


Annotation confidence Not enough data
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Genome context
DS562977.1: 2726066-2726130 [+]

Database links

Mature cpo-miR-223-5p

Accession MIMAT0047134
Description Cavia porcellus cpo-miR-223-5p mature miRNA
Sequence 1 - CGUGUAUUUGACAAGCUGAGUUG - 23
Evidence experimental
Illumina [1]

Mature cpo-miR-223-3p

Accession MIMAT0047135
Description Cavia porcellus cpo-miR-223-3p mature miRNA
Sequence 43 - UGUCAGUUUGUCAAAUACCCCAA - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344