miRBase entry: cpo-mir-299

Stem-loop cpo-mir-299

Accession

MI0038718

Description

Cavia porcellus cpo-mir-299 precursor miRNA

Sequence

aagaaaUGGUUUACCGUCCCACAUACAuuuuggguaugUAUGUGGGACGGUAAACCGCUUcuu
(((((.((((((((((((((((((((((.......)))))))))))))))))))))).)))))

Structure

     a                      uu 
aagaa UGGUUUACCGUCCCACAUACAu  u
||||| ||||||||||||||||||||||  g
uucUU GCCAAAUGGCAGGGUGUAUgua  g
     C                      ug

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

DS562966.1: 1083722-1083784 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from cpo-mir-299

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-299-5p

Accession	MIMAT0047140
Description	Cavia porcellus cpo-miR-299-5p mature miRNA
Sequence	7 - UGGUUUACCGUCCCACAUACA - 27
Evidence	experimental Illumina [1]

Mature cpo-miR-299-3p

Accession	MIMAT0047141
Description	Cavia porcellus cpo-miR-299-3p mature miRNA
Sequence	39 - UAUGUGGGACGGUAAACCGCUU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344