miRBase entry: cpo-mir-337

Stem-loop cpo-mir-337


Accession
MI0038734
Description
Cavia porcellus cpo-mir-337 precursor miRNA


Sequence

GAACGGCUUCAUACAGGAGUugauugcacaguuauucagcUCCUAUAUGAUGCCUUUCCUC
(((.(((.(((((.(((((((((.((......)).))))))))).))))).))).)))...

Structure
---   C   U     C         u  ca 
   GAA GGC UCAUA AGGAGUuga ug  c
   ||| ||| ||||| ||||||||| ||   
   CUU CCG AGUAU UCCUcgacu au  a
CUC   U   U     A         u  ug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
DS562966.1: 946840-946900 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from cpo-mir-337
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-337-5p

Accession MIMAT0047172
Description Cavia porcellus cpo-miR-337-5p mature miRNA
Sequence 1 - GAACGGCUUCAUACAGGAGU - 20
Evidence experimental
Illumina [1]

Mature cpo-miR-337-3p

Accession MIMAT0047173
Description Cavia porcellus cpo-miR-337-3p mature miRNA
Sequence 41 - UCCUAUAUGAUGCCUUUCCUC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344