miRBase entry: cpo-mir-346

Stem-loop cpo-mir-346


Accession
MI0038740
Description
Cavia porcellus cpo-mir-346 precursor miRNA


Sequence

UGUCUGCCCGCAUGCCUGCCUCUcuguugcucugaaggAGGCAGGGGCUGGGCCUGCAGC
(((..((((((...((((((((.((..........)))))))))).)).))))..)))..

Structure
--   CU    -  AUG        U  guug 
  UGU  GCCC GC   CCUGCCUC cu    c
  |||  |||| ||   |||||||| ||     
  ACG  CGGG CG   GGACGGAg ga    u
CG   UC    U  --G        -  aguc 


Annotation confidence Not enough data
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Genome context
DS562917.1: 5918308-5918367 [+]

Database links

Mature cpo-miR-346-5p

Accession MIMAT0047184
Description Cavia porcellus cpo-miR-346-5p mature miRNA
Sequence 1 - UGUCUGCCCGCAUGCCUGCCUCU - 23
Evidence experimental
Illumina [1]

Mature cpo-miR-346-3p

Accession MIMAT0047185
Description Cavia porcellus cpo-miR-346-3p mature miRNA
Sequence 39 - AGGCAGGGGCUGGGCCUGCAGC - 60
Evidence not_experimental

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344