miRBase entry: cpo-mir-376a

Stem-loop cpo-mir-376a


Accession
MI0038753
Description
Cavia porcellus cpo-mir-376a precursor miRNA


Sequence

GUAGAUUCUCCUUCUAUGAGUacauuauuuaugauuaAUCAUAGAGGAAAAUCCACGU
((.((((.((((.((((((...(((.....))).....)))))))))).)))).))..

Structure
--  A    C    U      --GUa   u 
  GU GAUU UCCU CUAUGA     cau a
  || |||| |||| ||||||     ||| u
  CA CUAA AGGA GAUACU     gua u
UG  C    A    -      Aauua   u 


Annotation confidence Not enough data
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Genome context
DS562966.1: 1096085-1096142 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from cpo-mir-376a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-376a-5p

Accession MIMAT0047209
Description Cavia porcellus cpo-miR-376a-5p mature miRNA
Sequence 1 - GUAGAUUCUCCUUCUAUGAGU - 21
Evidence experimental
Illumina [1]

Mature cpo-miR-376a-3p

Accession MIMAT0047210
Description Cavia porcellus cpo-miR-376a-3p mature miRNA
Sequence 38 - AUCAUAGAGGAAAAUCCACGU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344