miRBase entry: cpo-mir-376b

Stem-loop cpo-mir-376b

Accession

MI0038754

Description

Cavia porcellus cpo-mir-376b precursor miRNA

Sequence

GUGGAUAUUCCUUCUAUGUUUAcgugauucugaguuaAUCAUAGAGGAAAAUCCAUGU
((((((.(((((.(((((.(((..(.......)..))).)))))))))).))))))..

Structure

--      A     U     U   cg ga 
  GUGGAU UUCCU CUAUG UUA  u  u
  |||||| ||||| ||||| |||  |  u
  UACCUA AAGGA GAUAC Aau  a  c
UG      A     -     U   ug gu

Annotation confidence Not enough data

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Genome context

DS562966.1: 1095759-1095816 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from cpo-mir-376b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-376b-5p

Accession	MIMAT0047211
Description	Cavia porcellus cpo-miR-376b-5p mature miRNA
Sequence	1 - GUGGAUAUUCCUUCUAUGUUUA - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-376b-3p

Accession	MIMAT0047212
Description	Cavia porcellus cpo-miR-376b-3p mature miRNA
Sequence	38 - AUCAUAGAGGAAAAUCCAUGU - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344