miRBase entry: cpo-mir-382

Stem-loop cpo-mir-382


Accession
MI0038762
Description
Cavia porcellus cpo-mir-382 precursor miRNA


Sequence

GAAGUUGUUCGUGGUGGAUUCGcuuuacuuaugacgAAUCAUUCACGGACAACACUUUU
...(((((((((((..(((((((.........).))))))..)))))))))))......

Structure
---GAA           UG      - uuu 
      GUUGUUCGUGG  GAUUCG c   a
      |||||||||||  |||||| |   c
      CAACAGGCACU  CUAAgc g   u
UUUUCA           UA      a uau 


Annotation confidence Not enough data
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Genome context
DS562966.1: 1107038-1107096 [+]
Clustered miRNAs
14 other miRNAs are < 10 kb from cpo-mir-382
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-382-5p

Accession MIMAT0047227
Description Cavia porcellus cpo-miR-382-5p mature miRNA
Sequence 1 - GAAGUUGUUCGUGGUGGAUUCG - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-382-3p

Accession MIMAT0047228
Description Cavia porcellus cpo-miR-382-3p mature miRNA
Sequence 37 - AAUCAUUCACGGACAACACUUUU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344