miRBase entry: cpo-mir-412

Stem-loop cpo-mir-412


Accession
MI0038768
Description
Cavia porcellus cpo-mir-412 precursor miRNA


Sequence

UGGUCGACCAGUUGGAAAGUAAUugucucuaaugUACUUCACCUGGUCCACUAGCC
((((.((((((.(((..((((((((....)))).))))))).)))))).))))...

Structure
---    C      U   AA    -    u 
   UGGU GACCAG UGG  AGUA AUug c
   |||| |||||| |||  |||| ||||  
   AUCA CUGGUC ACU  UCAU uaau u
CCG    C      C   --    g    c 


Annotation confidence Not enough data
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Genome context
DS562966.1: 1117221-1117276 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from cpo-mir-412
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-412-5p

Accession MIMAT0047239
Description Cavia porcellus cpo-miR-412-5p mature miRNA
Sequence 1 - UGGUCGACCAGUUGGAAAGUAAU - 23
Evidence experimental
Illumina [1]

Mature cpo-miR-412-3p

Accession MIMAT0047240
Description Cavia porcellus cpo-miR-412-3p mature miRNA
Sequence 35 - UACUUCACCUGGUCCACUAGCC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344