miRBase entry: cpo-mir-448

Stem-loop cpo-mir-448


Accession
MI0038776
Description
Cavia porcellus cpo-mir-448 precursor miRNA


Sequence

GAACAUCCUGCAUGGUGCUGCCacgaaaucccuuugucauacuaagaggggacuggcuggUUGCACAUGUAGGAUGUCCCA
..((((((((((((.(((.(((((.(..(((((((.........)))))))..).).)))).)))))))))))))))....

Structure
--GA            G   U    - g aa       guc 
    ACAUCCUGCAUG UGC GCCa c a  ucccuuu   a
    |||||||||||| ||| |||| | |  |||||||   u
    UGUAGGAUGUAC ACG Uggu g u  ggggaga   a
ACCC            -   U    c g ca       auc 


Annotation confidence Not enough data
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Genome context
DS562901.1: 5141151-5141231 [-]

Database links

Mature cpo-miR-448-5p

Accession MIMAT0047255
Description Cavia porcellus cpo-miR-448-5p mature miRNA
Sequence 1 - GAACAUCCUGCAUGGUGCUGCC - 22
Evidence not_experimental

Mature cpo-miR-448-3p

Accession MIMAT0047256
Description Cavia porcellus cpo-miR-448-3p mature miRNA
Sequence 61 - UUGCACAUGUAGGAUGUCCCA - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344