miRBase entry: cpo-mir-454

Stem-loop cpo-mir-454


Accession
MI0038784
Description
Cavia porcellus cpo-mir-454 precursor miRNA


Sequence

ACCCUAUCAAUAUUGUCUCUGCUguauaaauagcucugagUAGUGCAAUAUUGCUUAUAGGGUUU
(((((((((((((((((((.(((((....)))))...)))....)))))))))...)))))))..

Structure
--       ---         ----   --U     a 
  ACCCUAU   CAAUAUUGU    CUC   GCUgu u
  |||||||   |||||||||    |||   |||||  
  UGGGAUA   GUUAUAACG    gag   cgaua a
UU       UUC         UGAU   ucu     a 


Annotation confidence Not enough data
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Genome context
DS562887.1: 7083450-7083514 [-]

Database links

Mature cpo-miR-454-5p

Accession MIMAT0047269
Description Cavia porcellus cpo-miR-454-5p mature miRNA
Sequence 1 - ACCCUAUCAAUAUUGUCUCUGCU - 23
Evidence experimental
Illumina [1]

Mature cpo-miR-454-3p

Accession MIMAT0047270
Description Cavia porcellus cpo-miR-454-3p mature miRNA
Sequence 41 - UAGUGCAAUAUUGCUUAUAGGGUUU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344