miRBase entry: cpo-mir-507a

Stem-loop cpo-mir-507a

Accession

MI0038807

Description

Cavia porcellus cpo-mir-507a precursor miRNA

Sequence

CACUCAAAAAGGUGCCAUUCagguaaauuaaaauaugACUGGCACAUUUUUGAGUGCA
((((((((((.((((((.(((.((........)).))).)))))).))))))))))..

Structure

--          G      U   g  aaa 
  CACUCAAAAA GUGCCA UCa gu   u
  |||||||||| |||||| ||| ||    
  GUGAGUUUUU CACGGU Agu ua   u
AC          A      C   a  aaa

Annotation confidence Not enough data

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Genome context

DS562939.1: 2762224-2762281 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from cpo-mir-507a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-507a-5p

Accession	MIMAT0047315
Description	Cavia porcellus cpo-miR-507a-5p mature miRNA
Sequence	1 - CACUCAAAAAGGUGCCAUUC - 20
Evidence	experimental Illumina [1]

Mature cpo-miR-507a-3p

Accession	MIMAT0047316
Description	Cavia porcellus cpo-miR-507a-3p mature miRNA
Sequence	38 - ACUGGCACAUUUUUGAGUGCA - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344