miRBase entry: cpo-mir-507b

Stem-loop cpo-mir-507b

Accession

MI0038808

Description

Cavia porcellus cpo-mir-507b precursor miRNA

Sequence

CACUCAAAAAGGUGCCAUUCAgguaaauuaaaauaugAUUGGCACUUUUUUGAGUGCA
(((((((((((((((((.(((.((........)).))).)))))))))))))))))..

Structure

--                 U   g  aaa 
  CACUCAAAAAGGUGCCA UCA gu   u
  ||||||||||||||||| ||| ||    
  GUGAGUUUUUUCACGGU Agu ua   u
AC                 U   a  aaa

Annotation confidence Not enough data

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Genome context

DS562939.1: 2763265-2763322 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-507b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-507b-5p

Accession	MIMAT0047317
Description	Cavia porcellus cpo-miR-507b-5p mature miRNA
Sequence	1 - CACUCAAAAAGGUGCCAUUCA - 21
Evidence	not_experimental

Mature cpo-miR-507b-3p

Accession	MIMAT0047318
Description	Cavia porcellus cpo-miR-507b-3p mature miRNA
Sequence	38 - AUUGGCACUUUUUUGAGUGCA - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344