miRBase entry: cpo-mir-656

Stem-loop cpo-mir-656

Accession

MI0038831

Description

Cavia porcellus cpo-mir-656 precursor miRNA

Sequence

AGGUUGCCUGUGAGGUGUUCAcuuucuauacgaugAAUAUUAUACAGUCAACCUCU
((((((.(((((.((((((((...((.....)))))))))).))))).))))))..

Structure

--      C     A        cuu  u 
  AGGUUG CUGUG GGUGUUCA   uc a
  |||||| ||||| ||||||||   || u
  UCCAAC GACAU UUAUAAgu   ag a
UC      U     A        ---  c

Annotation confidence Not enough data

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Genome context

DS562966.1: 1118353-1118408 [+]

Clustered miRNAs

9 other miRNAs are < 10 kb from cpo-mir-656

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-656-5p

Accession	MIMAT0047363
Description	Cavia porcellus cpo-miR-656-5p mature miRNA
Sequence	1 - AGGUUGCCUGUGAGGUGUUCA - 21
Evidence	experimental Illumina [1]

Mature cpo-miR-656-3p

Accession	MIMAT0047364
Description	Cavia porcellus cpo-miR-656-3p mature miRNA
Sequence	36 - AAUAUUAUACAGUCAACCUCU - 56
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344