Stem-loop cpo-mir-671

Accession

MI0038834

Description

Cavia porcellus cpo-mir-671 precursor miRNA

Sequence

AGGAAGCCCUGGAGGGGCUGGAGGugauggauguuuuccUCCGGUUCUCAGGGCUCCACC
.(((.((((((..(((((((((((.((.......)).))))))))))))))))))))...

Structure

--A   A      GA           u  ug 
   GGA GCCCUG  GGGGCUGGAGG ga  g
   ||| ||||||  ||||||||||| ||  a
   CCU CGGGAC  UCUUGGCCUcc uu  u
CCA   -      --           u  ug 

Annotation confidence Not enough data

Genome context

DS562887.1: 932637-932696 [+]

Mature cpo-miR-671-5p

• Accession: MIMAT0047369
• Description: Cavia porcellus cpo-miR-671-5p mature miRNA
• Sequence: 1 - AGGAAGCCCUGGAGGGGCUGGAGG - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-671-3p

• Accession: MIMAT0047370
• Description: Cavia porcellus cpo-miR-671-3p mature miRNA
• Sequence: 40 - UCCGGUUCUCAGGGCUCCACC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344