miRBase entry: cpo-mir-672

Stem-loop cpo-mir-672


Accession
MI0038835
Description
Cavia porcellus cpo-mir-672 precursor miRNA


Sequence

UGAGGUUGGUGUACUGUGUGUGGguauacauauuuaucCCACACAGCCACUAUGUUUCAAA
(((((.(((((..(((((((.(((((........)))))))))))).)))))..)))))..

Structure
--     -U     UA       U     uac 
  UGAGG  UGGUG  CUGUGUG GGgua   a
  |||||  |||||  ||||||| |||||    
  ACUUU  AUCAC  GACACAC Ccuau   u
AA     GU     -C       -     uua 


Annotation confidence Not enough data
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Genome context
DS562881.1: 21954918-21954978 [+]

Database links

Mature cpo-miR-672-5p

Accession MIMAT0047371
Description Cavia porcellus cpo-miR-672-5p mature miRNA
Sequence 1 - UGAGGUUGGUGUACUGUGUGUGG - 23
Evidence not_experimental

Mature cpo-miR-672-3p

Accession MIMAT0047372
Description Cavia porcellus cpo-miR-672-3p mature miRNA
Sequence 39 - CCACACAGCCACUAUGUUUCAAA - 61
Evidence not_experimental

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344