Stem-loop cpo-mir-1247

Accession

MI0038852

Description

Cavia porcellus cpo-mir-1247 precursor miRNA

Sequence

ACCCGUCCCGUUCGUCCCCGGAcguugcucugggcccCGGGAGCGUCGAGACUGGAGC
.((.(((.((..(((.(((((..(((......))).))))).))).)).))).))...

Structure

--A  C   C  UU   C     Ac   gc 
   CC GUC CG  CGU CCCGG  guu  u
   || ||| ||  ||| |||||  |||   
   GG CAG GC  GCG GGGCc  cgg  c
CGA  U   A  -U   A     -c   gu 

Annotation confidence Not enough data

Genome context

DS562966.1: 1834425-1834482 [-]

Mature cpo-miR-1247-5p

• Accession: MIMAT0047405
• Description: Cavia porcellus cpo-miR-1247-5p mature miRNA
• Sequence: 1 - ACCCGUCCCGUUCGUCCCCGGA - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-1247-3p

• Accession: MIMAT0047406
• Description: Cavia porcellus cpo-miR-1247-3p mature miRNA
• Sequence: 38 - CGGGAGCGUCGAGACUGGAGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344