miRBase entry: cpo-mir-1251

Stem-loop cpo-mir-1251


Accession
MI0038853
Description
Cavia porcellus cpo-mir-1251 precursor miRNA


Sequence

ACUCUAGCUGCCAAAGGCGCUucuccuucugaacagagCGCUUUGCUCAGCCAGUGUAG
((.((.((((...(((((((((.((.....))...)))))))))...)))).)).))..

Structure
--  U  A    CCA         --c  c 
  AC CU GCUG   AAGGCGCUu   uc u
  || || ||||   |||||||||   || u
  UG GA CGAC   UUUCGCgag   ag c
GA  U  C    UCG         aca  u 


Annotation confidence Not enough data
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Genome context
DS562864.1: 4581323-4581381 [-]

Database links

Mature cpo-miR-1251-5p

Accession MIMAT0047407
Description Cavia porcellus cpo-miR-1251-5p mature miRNA
Sequence 1 - ACUCUAGCUGCCAAAGGCGCU - 21
Evidence experimental
Illumina [1]

Mature cpo-miR-1251-3p

Accession MIMAT0047408
Description Cavia porcellus cpo-miR-1251-3p mature miRNA
Sequence 39 - CGCUUUGCUCAGCCAGUGUAG - 59
Evidence not_experimental

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344