miRBase entry: cpo-mir-12073

Stem-loop cpo-mir-12073

Accession

MI0038873

Description

Cavia porcellus cpo-mir-12073 precursor miRNA

Sequence

UUCAGAGUCGCUUGUCUCAUCCcgggggcaaccccuuguggcuaagaacaggAUGGGACGCGCAACUCUGUUUC
..((((((.((.((((((((((.((((....)))).(((........))))))))))))).)).))))))....

Structure

--UU      C  U          --------------c    g 
    CAGAGU GC UGUCUCAUCC               gggg c
    |||||| || ||||||||||               ||||  
    GUCUCA CG GCAGGGUAgg               cccc a
CUUU      A  C          acaagaaucgguguu    a

Annotation confidence Not enough data

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Genome context

DS562966.1: 952329-952402 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from cpo-mir-12073

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-12073-5p

Accession	MIMAT0047447
Description	Cavia porcellus cpo-miR-12073-5p mature miRNA
Sequence	1 - UUCAGAGUCGCUUGUCUCAUCC - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-12073-3p

Accession	MIMAT0047448
Description	Cavia porcellus cpo-miR-12073-3p mature miRNA
Sequence	53 - AUGGGACGCGCAACUCUGUUUC - 74
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344