miRBase entry: cpo-mir-12077

Stem-loop cpo-mir-12077


Accession
MI0038877
Description
Cavia porcellus cpo-mir-12077 precursor miRNA


Sequence

UGCUCAGAGUUGCGUCGGUUACuuagaguauacguAACUGAGGCCACUCUGGGUAGA
((((((((((.((.((((((((.((.....)).)))))))).)).))))))))))..

Structure
--          U  G        u  g 
  UGCUCAGAGU GC UCGGUUAC ua a
  |||||||||| || |||||||| || g
  AUGGGUCUCA CG AGUCAAug au u
AG          C  G        c  a 


Annotation confidence Not enough data
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Genome context
DS562939.1: 3933561-3933617 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cpo-mir-12077
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-12077-5p

Accession MIMAT0047455
Description Cavia porcellus cpo-miR-12077-5p mature miRNA
Sequence 1 - UGCUCAGAGUUGCGUCGGUUAC - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-12077-3p

Accession MIMAT0047456
Description Cavia porcellus cpo-miR-12077-3p mature miRNA
Sequence 36 - AACUGAGGCCACUCUGGGUAGA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344