miRBase entry: dno-let-7d

Stem-loop dno-let-7d


Accession
MI0038890
Description
Dasypus novemcinctus dno-let-7d precursor miRNA


Sequence

AGAGGUAGUAGGUUGCAUAGUUuuggggcagggauuuugcccacaaggagguaaCUAUACGACCUGCUGCCUUUCU
.((((((((((((((.(((((((((((((((.....)))))).)))......)))))).))))))))))))))...

Structure
--A              C      ------   -      g 
   GAGGUAGUAGGUUG AUAGUU      uug gggcag g
   |||||||||||||| ||||||      ||| |||||| a
   UUCCGUCGUCCAGC UAUCaa      aac cccguu u
UCU              A      uggagg   a      u 


Annotation confidence Not enough data
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Genome context
JH563897.1: 148046-148121 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dno-let-7d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-let-7d-5p

Accession MIMAT0047480
Description Dasypus novemcinctus dno-let-7d-5p mature miRNA
Sequence 1 - AGAGGUAGUAGGUUGCAUAGUU - 22
Evidence experimental
Illumina [1]

Mature dno-let-7d-3p

Accession MIMAT0047481
Description Dasypus novemcinctus dno-let-7d-3p mature miRNA
Sequence 55 - CUAUACGACCUGCUGCCUUUCU - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344