miRBase entry: dno-mir-17

Stem-loop dno-mir-17


Accession
MI0038909
Description
Dasypus novemcinctus dno-mir-17 precursor miRNA


Sequence

CAAAGUGCUUACAGUGCAGGUAGugauaugugcaucuACUGCAGUGAAGGCACUUGUAG
..((((((((.((.(((((.(((((.......)).)))))))).)).))))))))....

Structure
--CA        A  G     G   -  au 
    AAGUGCUU CA UGCAG UAG ug  a
    |||||||| || ||||| ||| ||  u
    UUCACGGA GU ACGUC Auc ac  g
GAUG        A  G     -   u  gu 


Annotation confidence Not enough data
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Genome context
JH570327.1: 92325-92383 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from dno-mir-17
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-17-5p

Accession MIMAT0047509
Description Dasypus novemcinctus dno-miR-17-5p mature miRNA
Sequence 1 - CAAAGUGCUUACAGUGCAGGUAG - 23
Evidence experimental
Illumina [1]

Mature dno-miR-17-3p

Accession MIMAT0047510
Description Dasypus novemcinctus dno-miR-17-3p mature miRNA
Sequence 38 - ACUGCAGUGAAGGCACUUGUAG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344