miRBase entry: dno-mir-133b

Stem-loop dno-mir-133b


Accession
MI0038979
Description
Dasypus novemcinctus dno-mir-133b precursor miRNA


Sequence

GCUGGUCAAACGGAACCAAGUCcgucuucuugagaggUUUGGUCCCCUUCAACCAGCUA
((((((..((.((.((((((.((.((((...)))))))))))).)).))..))))))..

Structure
--      CA  C  A      U  g    c 
  GCUGGU  AA GG ACCAAG Cc ucuu  
  ||||||  || || |||||| || |||| u
  CGACCA  UU CC UGGUUU gg agag  
AU      AC  C  C      -  -    u 


Annotation confidence Not enough data
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Genome context
JH569061.1: 724912-724970 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dno-mir-133b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-133b-5p

Accession MIMAT0047635
Description Dasypus novemcinctus dno-miR-133b-5p mature miRNA
Sequence 1 - GCUGGUCAAACGGAACCAAGUC - 22
Evidence experimental
Illumina [1]

Mature dno-miR-133b-3p

Accession MIMAT0047636
Description Dasypus novemcinctus dno-miR-133b-3p mature miRNA
Sequence 38 - UUUGGUCCCCUUCAACCAGCUA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344