miRBase entry: dno-mir-339

Stem-loop dno-mir-339


Accession
MI0039075
Description
Dasypus novemcinctus dno-mir-339 precursor miRNA

Literature search
1 open access papers mention dno-mir-339
(1 sentences)

Sequence

UCCCUGUCCUCCAGGAGCUCACGugggucaggcugUGAGCGCCUCGAGGGCAGAGCCC
...((((((((.(((.((((((((.......)).)))))).))).)))))))).....

Structure
--UCC        C   A      -  gg 
     CUGUCCUC AGG GCUCAC Gu  g
     |||||||| ||| |||||| ||  u
     GACGGGAG UCC CGAGUg cg  c
CCCGA        C   G      u  ga 


Annotation confidence Not enough data
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Genome context
JH583004.1: 187782-187839 [+]

Database links

Mature dno-miR-339-5p

Accession MIMAT0047821
Description Dasypus novemcinctus dno-miR-339-5p mature miRNA
Sequence 1 - UCCCUGUCCUCCAGGAGCUCACG - 23
Evidence experimental
Illumina [1]

Mature dno-miR-339-3p

Accession MIMAT0047822
Description Dasypus novemcinctus dno-miR-339-3p mature miRNA
Sequence 36 - UGAGCGCCUCGAGGGCAGAGCCC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344