miRBase entry: dno-mir-449b

Stem-loop dno-mir-449b


Accession
MI0039112
Description
Dasypus novemcinctus dno-mir-449b precursor miRNA


Sequence

aggcaguguauuguuagcuggcugcuuuggaucaguucagcAGCCGGGACUACCUGCCACC
.(((((.(((..(((..(((((((((...((.....))))))))))))))))))))))...

Structure
--a     u   uu   ag         uug  u 
   ggcag gua  guu  cuggcugcu   ga c
   ||||| |||  |||  |||||||||   || a
   CCGUC CAU  CAG  GGCCGAcga   cu g
CCA     -   --   --         ---  u 


Annotation confidence Not enough data
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Genome context
JH582746.1: 1406147-1406207 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dno-mir-449b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-449b-3p

Accession MIMAT0047894
Description Dasypus novemcinctus dno-miR-449b-3p mature miRNA
Sequence 42 - AGCCGGGACUACCUGCCACC - 61
Evidence not_experimental

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344