miRBase entry: dno-mir-545

Stem-loop dno-mir-545


Accession
MI0039153
Description
Dasypus novemcinctus dno-mir-545 precursor miRNA


Sequence

CUGAGUAAAUGUUUAUUGGAUGaauaaaugaaugacucaUCAACAAACAUUUAUUGUGUGC
...(((((((((((....(((((.............)))))...)))))))))))......

Structure
---CUG           AUUG     auaaa 
      AGUAAAUGUUU    GAUGa     u
      |||||||||||    |||||     g
      UUAUUUACAAA    CUacu     a
CGUGUG           -CAA     cagua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH568995.1: 131983-132043 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dno-mir-545
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-545-5p

Accession MIMAT0047973
Description Dasypus novemcinctus dno-miR-545-5p mature miRNA
Sequence 1 - CUGAGUAAAUGUUUAUUGGAUG - 22
Evidence experimental
Illumina [1]

Mature dno-miR-545-3p

Accession MIMAT0047974
Description Dasypus novemcinctus dno-miR-545-3p mature miRNA
Sequence 40 - UCAACAAACAUUUAUUGUGUGC - 61
Evidence not_experimental

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344