Stem-loop ocu-mir-23b

Accession

MI0039235

Description

Oryctolagus cuniculus ocu-mir-23b precursor miRNA

Literature search

1 open access papers mention ocu-mir-23b
(2 sentences)

Sequence

GGGUUCCUGGCAUGCUGAUUUgugacuuaagauuaaaAUCACAUUGCCAGGGAUUACCAC
((((((((((((((.((((((..............)))))))).))))))))))..))..

Structure

--  --          -  C      gugacu 
  GG  GUUCCUGGCA UG UGAUUU      u
  ||  |||||||||| || ||||||       
  CC  UAGGGACCGU AC ACUAaa      a
CA  AU          U  -      auuaga 

Annotation confidence Not enough data

Genome context

CM000790.1: 74102158-74102217 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-23b

Mature ocu-miR-23b-5p

• Accession: MIMAT0048128
• Description: Oryctolagus cuniculus ocu-miR-23b-5p mature miRNA
• Sequence: 1 - GGGUUCCUGGCAUGCUGAUUU - 21
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-23b-3p

• Accession: MIMAT0048129
• Description: Oryctolagus cuniculus ocu-miR-23b-3p mature miRNA
• Sequence: 38 - AUCACAUUGCCAGGGAUUACCAC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344