miRBase entry: ocu-mir-30d

Stem-loop ocu-mir-30d

Accession

MI0039251

Description

Oryctolagus cuniculus ocu-mir-30d precursor miRNA

Sequence

UGUAAACAUCCCCGACUGGAAGCUguaaaacaacuaagCUUUCAGUCAGAUGUUUGCUGC
.(((((((((...(((((((((((............))))))))))).)))))))))...

Structure

--U         CCC           guaaa 
   GUAAACAUC   GACUGGAAGCU     a
   |||||||||   |||||||||||      
   CGUUUGUAG   CUGACUUUCga     c
CGU         --A           aucaa

Annotation confidence Not enough data

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Genome context

CM000792.1: 150424946-150425005 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-30d

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-30d-5p

Accession	MIMAT0048157
Description	Oryctolagus cuniculus ocu-miR-30d-5p mature miRNA
Sequence	1 - UGUAAACAUCCCCGACUGGAAGCU - 24
Evidence	experimental Illumina [1]

Mature ocu-miR-30d-3p

Accession	MIMAT0048158
Description	Oryctolagus cuniculus ocu-miR-30d-3p mature miRNA
Sequence	39 - CUUUCAGUCAGAUGUUUGCUGC - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344