miRBase entry: ocu-mir-125b-1

Stem-loop ocu-mir-125b-1


Accession
MI0039278
Description
Oryctolagus cuniculus ocu-mir-125b-1 precursor miRNA

Literature search
1 open access papers mention ocu-mir-125b-1
(2 sentences)

Sequence

UCCCUGAGACCCUAACUUGUGAuguuuaccguuuaaauccACGGGUUAGGCUCUUGGGAGCU
((((.((((.(((((((((((..(((((.....))))).))))))))))).))))))))...

Structure
---    U    C           Au     c 
   UCCC GAGA CCUAACUUGUG  guuua c
   |||| |||| |||||||||||  ||||| g
   AGGG UUCU GGAUUGGGCAc  uaaau u
UCG    -    C           -c     u 


Annotation confidence Not enough data
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Genome context
CM000790.1: 95926707-95926768 [+]

Database links

Mature ocu-miR-125b-5p

Accession MIMAT0048205
Description Oryctolagus cuniculus ocu-miR-125b-5p mature miRNA
Sequence 1 - UCCCUGAGACCCUAACUUGUGA - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-125b-3p

Accession MIMAT0048206
Description Oryctolagus cuniculus ocu-miR-125b-3p mature miRNA
Sequence 41 - ACGGGUUAGGCUCUUGGGAGCU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344