miRBase entry: ocu-mir-125b-2

Stem-loop ocu-mir-125b-2


Accession
MI0039279
Description
Oryctolagus cuniculus ocu-mir-125b-2 precursor miRNA

Literature search
1 open access papers mention ocu-mir-125b-2
(2 sentences)

Sequence

UCCCUGAGACCCUAACUUGUGAgguauuuuaguaacaucACAAGUCAGGCUCUUGGGACCU
..(((((((.(((.((((((((.((.........)).)))))))).))).)))))))....

Structure
--UC       C   A        g  auu 
    CCUGAGA CCU ACUUGUGA gu   u
    ||||||| ||| |||||||| ||   u
    GGGUUCU GGA UGAACAcu ca   a
UCCA       C   C        a  aug 


Annotation confidence Not enough data
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Genome context
CM000803.1: 144598484-144598544 [+]

Database links

Mature ocu-miR-125b-5p

Accession MIMAT0048205
Description Oryctolagus cuniculus ocu-miR-125b-5p mature miRNA
Sequence 1 - UCCCUGAGACCCUAACUUGUGA - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-125b-2-3p

Accession MIMAT0048207
Description Oryctolagus cuniculus ocu-miR-125b-2-3p mature miRNA
Sequence 40 - ACAAGUCAGGCUCUUGGGACCU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344