miRBase entry: ocu-mir-134

Stem-loop ocu-mir-134


Accession
MI0039289
Description
Oryctolagus cuniculus ocu-mir-134 precursor miRNA


Sequence

UGUGACUGGUUGACCAGAGGGCgugcgcuguguucacccUGUGGGCCACCUAGUCACCAA
.((((((((.((.(((.((((.(.((.....)).).)))).)))..)).))))))))...

Structure
--U        U  -A   G    C u  g 
   GUGACUGG UG  CCA AGGG g gc c
   |||||||| ||  ||| |||| | || u
   CACUGAUC AC  GGU Uccc c ug g
AAC        C  CG   G    a u  u 


Annotation confidence Not enough data
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Genome context
GL019048.1: 143048-143107 [+]
Clustered miRNAs
18 other miRNAs are < 10 kb from ocu-mir-134
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-134-5p

Accession MIMAT0048225
Description Oryctolagus cuniculus ocu-miR-134-5p mature miRNA
Sequence 1 - UGUGACUGGUUGACCAGAGGGC - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-134-3p

Accession MIMAT0048226
Description Oryctolagus cuniculus ocu-miR-134-3p mature miRNA
Sequence 40 - UGUGGGCCACCUAGUCACCAA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344