miRBase entry: ocu-mir-136

Stem-loop ocu-mir-136

Accession

MI0039293

Description

Oryctolagus cuniculus ocu-mir-136 precursor miRNA

Sequence

ACUCCAUUUGUUUUGAUGAUGGAuucuuaggcucCAUCAUCGUCUCAAAUGAGUCU
((((.(((((...((((((((((.((...)).))))))))))...)))))))))..

Structure

--    C     UUU          u  u 
  ACUC AUUUG   UGAUGAUGGA uc  
  |||| |||||   |||||||||| || u
  UGAG UAAAC   GCUACUACcu gg  
UC    -     UCU          c  a

Annotation confidence Not enough data

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Genome context

GL019048.1: 10072-10127 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ocu-mir-136

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-136-5p

Accession	MIMAT0048232
Description	Oryctolagus cuniculus ocu-miR-136-5p mature miRNA
Sequence	1 - ACUCCAUUUGUUUUGAUGAUGGA - 23
Evidence	experimental Illumina [1]

Mature ocu-miR-136-3p

Accession	MIMAT0048233
Description	Oryctolagus cuniculus ocu-miR-136-3p mature miRNA
Sequence	35 - CAUCAUCGUCUCAAAUGAGUCU - 56
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344