miRBase entry: ocu-mir-139

Stem-loop ocu-mir-139


Accession
MI0039297
Description
Oryctolagus cuniculus ocu-mir-139 precursor miRNA


Sequence

UCUACAGUGCACGUGUCUCCAGUguggcuuggaggcUGGAGACGCGGCCCUGUUGGAGU
(((((((.((.((((((((((((.(.......).)))))))))))))).))).))))..

Structure
--    -   U  A            g gg 
  UCUA CAG GC CGUGUCUCCAGU u  c
  |||| ||| || |||||||||||| |  u
  AGGU GUC CG GCGCAGAGGUcg a  u
UG    U   C  -            g gg 


Annotation confidence Not enough data
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Genome context
CM000790.1: 143799359-143799417 [+]

Database links

Mature ocu-miR-139-5p

Accession MIMAT0048239
Description Oryctolagus cuniculus ocu-miR-139-5p mature miRNA
Sequence 1 - UCUACAGUGCACGUGUCUCCAGU - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-139-3p

Accession MIMAT0048240
Description Oryctolagus cuniculus ocu-miR-139-3p mature miRNA
Sequence 37 - UGGAGACGCGGCCCUGUUGGAGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344