Stem-loop ocu-mir-144

Accession

MI0039302

Description

Oryctolagus cuniculus ocu-mir-144 precursor miRNA

Sequence

GGAUAUCAUCAUAUACUGUAAGUuugagaugagacacUACAGUAUAGAUGAUGUACUA
((((((((((.(((((((((.((((......))))..))))))))))))))))).)).

Structure

-  -        A         -A    ga 
 GG AUAUCAUC UAUACUGUA  GUuu  g
 || |||||||| |||||||||  ||||   
 UC UGUAGUAG AUAUGACAU  caga  a
A  A        -         ca    gu 

Annotation confidence Not enough data

Genome context

CM000808.1: 19330299-19330356 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-144

Mature ocu-miR-144-5p

• Accession: MIMAT0048249
• Description: Oryctolagus cuniculus ocu-miR-144-5p mature miRNA
• Sequence: 1 - GGAUAUCAUCAUAUACUGUAAGU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-144-3p

• Accession: MIMAT0048250
• Description: Oryctolagus cuniculus ocu-miR-144-3p mature miRNA
• Sequence: 38 - UACAGUAUAGAUGAUGUACUA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344