miRBase entry: ocu-mir-182

Stem-loop ocu-mir-182

Accession

MI0039321

Description

Oryctolagus cuniculus ocu-mir-182 precursor miRNA

Sequence

UUUGGCAAUGGUAGAACUCACACUggugagguaugggauccggUGGUUCUAGACUUGCCAACUA
.(((((((...((((((...((((((.............))))))))))))...)))))))...

Structure

--U       UGG      UCA      ugagg 
   UUGGCAA   UAGAAC   CACUgg     u
   |||||||   ||||||   ||||||     a
   AACCGUU   AUCUUG   GUggcc     u
AUC       CAG      ---      uaggg

Annotation confidence Not enough data

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Genome context

CM000796.1: 14830047-14830110 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-182

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-182-5p

Accession	MIMAT0048285
Description	Oryctolagus cuniculus ocu-miR-182-5p mature miRNA
Sequence	1 - UUUGGCAAUGGUAGAACUCACACU - 24
Evidence	experimental Illumina [1]

Mature ocu-miR-182-3p

Accession	MIMAT0048286
Description	Oryctolagus cuniculus ocu-miR-182-3p mature miRNA
Sequence	44 - UGGUUCUAGACUUGCCAACUA - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344