miRBase entry: ocu-mir-196a-2

Stem-loop ocu-mir-196a-2


Accession
MI0039335
Description
Oryctolagus cuniculus ocu-mir-196a-2 precursor miRNA

Literature search
2 open access papers mention ocu-mir-196a-2
(2 sentences)

Sequence

UAGGUAGUUUCAUGUUGUUGGGAuugaguuuugaacUCGGCAACAAGAAACUGCCUGAG
(((((((((((.((((((((((.((........)))))))))))).)))))))))))..

Structure
--           A          A  gag 
  UAGGUAGUUUC UGUUGUUGGG uu   u
  ||||||||||| |||||||||| ||    
  GUCCGUCAAAG ACAACGGCUc aa   u
GA           A          -  guu 


Annotation confidence Not enough data
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Genome context
CM000793.1: 37775899-37775957 [+]

Database links

Mature ocu-miR-196a-2-5p

Accession MIMAT0048313
Description Oryctolagus cuniculus ocu-miR-196a-2-5p mature miRNA
Sequence 1 - UAGGUAGUUUCAUGUUGUUGGGA - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-196a-2-3p

Accession MIMAT0048314
Description Oryctolagus cuniculus ocu-miR-196a-2-3p mature miRNA
Sequence 37 - UCGGCAACAAGAAACUGCCUGAG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344