miRBase entry: ocu-mir-217

Stem-loop ocu-mir-217


Accession
MI0039352
Description
Oryctolagus cuniculus ocu-mir-217 precursor miRNA


Sequence

AUACUGCAUCAGGAACUGAUUGgauaagaaucugucaccAUCAGUUCCUAAUGCAUUGCCU
....(((((.((((((((((.(((((......)))).).)))))))))).)))))......

Structure
--AUAC     C          U -    ag 
      UGCAU AGGAACUGAU G gaua  a
      ||||| |||||||||| | ||||   
      ACGUA UCCUUGACUA c cugu  a
UCCGUU     A          c a    cu 


Annotation confidence Not enough data
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Genome context
CM000791.1: 130108838-130108898 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ocu-mir-217
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-217-5p

Accession MIMAT0048345
Description Oryctolagus cuniculus ocu-miR-217-5p mature miRNA
Sequence 1 - AUACUGCAUCAGGAACUGAUUG - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-217-3p

Accession MIMAT0048346
Description Oryctolagus cuniculus ocu-miR-217-3p mature miRNA
Sequence 40 - AUCAGUUCCUAAUGCAUUGCCU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344