miRBase entry: ocu-mir-219b

Stem-loop ocu-mir-219b


Accession
MI0039356
Description
Oryctolagus cuniculus ocu-mir-219b precursor miRNA


Sequence

UGAUUGUCCAAACGCAAUUCUUGuacgagucugcggccaaccgAGAAUUGUGGCUGGACAUCUGU
.(((.(((((..(((((((((((...(.(((...))))...)))))))))))..))))))))...

Structure
--U   U     AA           uac a   u 
   GAU GUCCA  CGCAAUUCUUG   g guc  
   ||| |||||  |||||||||||   | ||| g
   CUA CAGGU  GUGUUAAGAgc   c cgg  
UGU   -     CG           caa -   c 


Annotation confidence Not enough data
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Genome context
GL018847.1: 254882-254946 [+]

Database links

Mature ocu-miR-219b-5p

Accession MIMAT0048352
Description Oryctolagus cuniculus ocu-miR-219b-5p mature miRNA
Sequence 1 - UGAUUGUCCAAACGCAAUUCUUG - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-219b-3p

Accession MIMAT0048353
Description Oryctolagus cuniculus ocu-miR-219b-3p mature miRNA
Sequence 44 - AGAAUUGUGGCUGGACAUCUGU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344