miRBase entry: ocu-mir-337

Stem-loop ocu-mir-337


Accession
MI0039372
Description
Oryctolagus cuniculus ocu-mir-337 precursor miRNA


Sequence

GAACGGCUUCAUACAGGAGUugauugcacagucauccagcUCCUAUAUGAUGCCUUUCUUC
(((.(((.(((((.((((((((..((......))..)))))))).))))).))).)))...

Structure
---   C   U     C        au  ca 
   GAA GGC UCAUA AGGAGUug  ug  c
   ||| ||| ||||| ||||||||  ||   
   CUU CCG AGUAU UCCUcgac  ac  a
CUU   U   U     A        cu  ug 


Annotation confidence Not enough data
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Genome context
GL019048.1: 1562-1622 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from ocu-mir-337
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-337-5p

Accession MIMAT0048384
Description Oryctolagus cuniculus ocu-miR-337-5p mature miRNA
Sequence 1 - GAACGGCUUCAUACAGGAGU - 20
Evidence experimental
Illumina [1]

Mature ocu-miR-337-3p

Accession MIMAT0048385
Description Oryctolagus cuniculus ocu-miR-337-3p mature miRNA
Sequence 41 - UCCUAUAUGAUGCCUUUCUUC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344