miRBase entry: ocu-mir-410

Stem-loop ocu-mir-410


Accession
MI0039399
Description
Oryctolagus cuniculus ocu-mir-410 precursor miRNA


Sequence

AGGUUGUCUGUGAUGAGUUCGcuguauuaaagccgAAUAUAACACAGAUGGCCUGU
((((((((((((.((.(((((((.......)).))))).)).))))))))))))..

Structure
--            A  A     -  gu 
  AGGUUGUCUGUG UG GUUCG cu  a
  |||||||||||| || ||||| ||  u
  UCCGGUAGACAC AU UAAgc ga  u
UG            A  A     c  aa 


Annotation confidence Not enough data
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Genome context
GL019048.1: 153189-153244 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from ocu-mir-410
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-410-5p

Accession MIMAT0048435
Description Oryctolagus cuniculus ocu-miR-410-5p mature miRNA
Sequence 1 - AGGUUGUCUGUGAUGAGUUCG - 21
Evidence experimental
Illumina [1]

Mature ocu-miR-410-3p

Accession MIMAT0048436
Description Oryctolagus cuniculus ocu-miR-410-3p mature miRNA
Sequence 36 - AAUAUAACACAGAUGGCCUGU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344