miRBase entry: ocu-mir-450b

Stem-loop ocu-mir-450b


Accession
MI0039412
Description
Oryctolagus cuniculus ocu-mir-450b precursor miRNA


Sequence

UUUUGCAAUAUGUUCCUGAAUAuguaaucuaaguguAUUGGGGACAUUUUGCAUCCAU
...(((((.((((((((((((((.........)))).)))))))))).))))).....

Structure
--UUU     U          -    gua 
     UGCAA AUGUUCCUGA AUAu   a
     ||||| |||||||||| ||||   u
     ACGUU UACAGGGGUU ugug   c
UACCU     U          A    aau 


Annotation confidence Not enough data
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Genome context
CM000811.1: 108850008-108850065 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from ocu-mir-450b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-450b-5p

Accession MIMAT0048460
Description Oryctolagus cuniculus ocu-miR-450b-5p mature miRNA
Sequence 1 - UUUUGCAAUAUGUUCCUGAAUA - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-450b-3p

Accession MIMAT0048461
Description Oryctolagus cuniculus ocu-miR-450b-3p mature miRNA
Sequence 37 - AUUGGGGACAUUUUGCAUCCAU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344